2017-05-25 17:39:492025-05-29 12:59:10
description
similar to ABC transporter (permease)
polygalacturonan and rhamnogalacturonan [SW|ABC transporter] (permease)
locus
BSU30170
BSU_30170
geneLength
858
861
function
unknown
uptake of polygalacturonan and rhamnogalacturonan
product
unknown
polygalacturonan and rhamnogalacturonan [SW|ABC transporter] (permease)
outlinks
bsu
BSU30170
BSU_30170
Gene
Coordinates
3,087,321 → 3,088,181
3,087,321 3,088,181
The protein
Protein family
CysTW subfamily (according to Swiss-Prot)
[SW|Binding-protein-dependent transport system permease family] (according to UniProt)
[SW|CysTW subfamily] (according to UniProt)
The protein
Structure
[PDB|4TQU] (36% identity)
[PDB|4TQU] (from Sphingomonas sp., 36% identity) [pubmed|26235029]
Biological materials
Mutant
MGNA-B536 (ytcP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1535 NBRP B. subtilis, Japan]
MGNA-B536 (ytcP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1535 NBRP B. subtilis, Japan]
BKE30170 ([[gene|ytcP]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30170 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAGTGAATGTGCGATAGCTC, downstream forward: _UP4_TAAAGAAATATGAAACGGAG
BKK30170 ([[gene|ytcP]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30170 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAGTGAATGTGCGATAGCTC, downstream forward: _UP4_TAAAGAAATATGAAACGGAG
References
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Domains]
[SW|ABC transmembrane type-1 domain] (aa 69-271) (according to UniProt)
Expression and Regulation
additional information
translation is likely to require [[protein|Efp]] due to the presence of several consecutive proline residues [PubMed|23239624,23239623]